[English] 日本語
EMN search
- 3DEM data search -

-
Search query


Keywords
Database /
Q: What are the data sources of EM Navigator?
Data entries / weeks ago
Q: When the data are updated?
Author
Processing method
Display mode
Sort by
Num. of entries / page
Entry
Article
Sample
Experiment
Processing
Max number of data0 for all data
File format
  • CSV format (Comma-Separated Values, for Excel, etc.)
  • TSV format (Tab Separated Values, for Excel, etc.)
  • JSON format

Yorodumi Search

-
Search result

Showing 1 - 50 of 54 items for (author: pellegrini & e)

EMDB-17795:
Cryo-EM structure of human DNA polymerase alpha-primase in pre-initiation stage 1
Method: single particle / : Yin Z, Pellegrini L

EMDB-17807:
Cryo-EM structure of human DNA polymerase alpha-primase in pre-initiation stage 2
Method: single particle / : Yin Z, Pellegrini L

EMDB-17810:
Cryo-EM structure of human DNA polymerase alpha-primase in pre-initiation stage 3
Method: single particle / : Yin Z, Pellegrini L

EMDB-17811:
Cryo-EM structure of human DNA polymerase alpha-primase in pre-initiation stage 4
Method: single particle / : Yin Z, Pellegrini L

EMDB-17812:
Cryo-EM structure of human DNA polymerase alpha-primase at initiation I
Method: single particle / : Yin Z, Pellegrini L

EMDB-17813:
Cryo-EM structure of human DNA polymerase alpha-primase at initiation II
Method: single particle / : Yin Z, Pellegrini L

EMDB-17824:
Cryo-EM structure of human DNA polymerase alpha-primase in primer handover
Method: single particle / : Yin Z, Pellegrini L

PDB-8qj7:
Cryo-EM structure of human DNA polymerase alpha-primase in pre-initiation stage 1
Method: single particle / : Yin Z, Pellegrini L

EMDB-16321:
Structure of the human nuclear cap-binding complex bound to NCBP3(560-620) and cap-analogue m7GpppG
Method: single particle / : Dubiez E, Pellegrini E, Foucher AE, Cusack S, Kadlec J

PDB-8by6:
Structure of the human nuclear cap-binding complex bound to NCBP3(560-620) and cap-analogue m7GpppG
Method: single particle / : Dubiez E, Pellegrini E, Foucher AE, Cusack S, Kadlec J

EMDB-17763:
Structure of the human nuclear cap-binding complex bound to ARS2[147-871] and m7GTP
Method: single particle / : Dubiez E, Pellegrini E, Foucher AE, Cusack S, Kadlec J

EMDB-17784:
Structure of the human nuclear cap-binding complex bound to PHAX and m7G-capped RNA
Method: single particle / : Dubiez E, Pellegrini E, Foucher AE, Cusack S, Kadlec J

PDB-8pmp:
Structure of the human nuclear cap-binding complex bound to ARS2[147-871] and m7GTP
Method: single particle / : Dubiez E, Pellegrini E, Foucher AE, Cusack S, Kadlec J

PDB-8pnt:
Structure of the human nuclear cap-binding complex bound to PHAX and m7G-capped RNA
Method: single particle / : Dubiez E, Pellegrini E, Foucher AE, Cusack S, Kadlec J

EMDB-17584:
RAD51 filament on ssDNA bound by the BRCA2 c-terminus
Method: helical / : Appleby R, Pellegrini L

EMDB-17585:
RAD51 filament on dsDNA bound by the BRCA2 c-terminus
Method: helical / : Appleby R, Pellegrini L

PDB-8pbc:
RAD51 filament on ssDNA bound by the BRCA2 c-terminus
Method: helical / : Appleby R, Pellegrini L

PDB-8pbd:
RAD51 filament on dsDNA bound by the BRCA2 c-terminus
Method: helical / : Appleby R, Pellegrini L

EMDB-16170:
CryoEM structure of the pre-synaptic RAD51 nucleoprotein filament in the presence of ATP and Ca2+
Method: helical / : Appleby R, Bollschweiler D, Pellegrini L

EMDB-16197:
CryoEM structure of the post-synaptic RAD51 nucleoprotein filament in the presence of ATP and Ca2+
Method: single particle / : Appleby R, Bollschweiler D, Pellegrini L

EMDB-16224:
CryoEM structure of the RAD51 nucleoprotein filament in the presence of ADP and Ca2+
Method: helical / : Appleby R, Bollschweiler D, Pellegrini L

PDB-8bq2:
CryoEM structure of the pre-synaptic RAD51 nucleoprotein filament in the presence of ATP and Ca2+
Method: helical / : Appleby R, Bollschweiler D, Pellegrini L

PDB-8br2:
CryoEM structure of the post-synaptic RAD51 nucleoprotein filament in the presence of ATP and Ca2+
Method: single particle / : Appleby R, Bollschweiler D, Pellegrini L

PDB-8bsc:
CryoEM structure of the RAD51 nucleoprotein filament in the presence of ADP and Ca2+
Method: helical / : Appleby R, Bollschweiler D, Pellegrini L

EMDB-28189:
SARS-CoV-2 Spike in complex with biparatopic nanobody BP10
Method: single particle / : Pymm PG, Glukhova A, Tham WH

EMDB-28190:
SARS-CoV-2 RBD in complex with biparatopic nanobody BP10 local refinement
Method: single particle / : Pymm PG, Glukhova A, Tham WH

EMDB-15757:
Structure of RIP2K dimer bound to the XIAP BIR2 domain
Method: single particle / : Pellegrini E, Cusack S

PDB-8aza:
Structure of RIP2K dimer bound to the XIAP BIR2 domain
Method: single particle / : Pellegrini E, Cusack S

EMDB-15233:
Structure of the MAPK p38alpha in complex with its activating MAP2K MKK6
Method: single particle / : Bowler MW, Juyoux P, Pellegrini E

PDB-8a8m:
Structure of the MAPK p38alpha in complex with its activating MAP2K MKK6
Method: single particle / : Bowler MW, Juyoux P, Pellegrini E

EMDB-13020:
CryoEM structure of DNA Polymerase alpha - primase bound to SARS CoV nsp1
Method: single particle / : Kilkenny ML, Pellegrini L

EMDB-13021:
CryoEM structure of DNA polymerase alpha - primase bound to SARS CoV nsp1 protein
Method: single particle / : Kilkenny ML, Pellegrini L

PDB-7opl:
CryoEM structure of DNA Polymerase alpha - primase bound to SARS CoV nsp1
Method: single particle / : Kilkenny ML, Pellegrini L

EMDB-24642:
SARS-CoV-2 Spike bound to Fab PDI 210
Method: single particle / : Pymm P, Glukhova A, Black K, Tham WH

EMDB-24643:
SARS-CoV-2 Spike bound to Fab PDI 96
Method: single particle / : Pymm P, Glukhova A, Black K, Tham WH

EMDB-24644:
SARS-CoV-2 Spike bound to Fab PDI 215
Method: single particle / : Black K, Glukhova A, Pymm P, Tham WH

EMDB-24645:
SARS-CoV-2 Spike bound to Fab WCSL 119
Method: single particle / : Black K, Glukhova A, Pymm P, Tham WH

EMDB-24646:
SARS-CoV-2 Spike bound to Fab WCSL 129
Method: single particle / : Black K, Glukhova A, Pymm P, Tham WH

EMDB-24647:
SARS-CoV-2 Spike bound to Fab PDI 93
Method: single particle / : Black K, Glukhova A, Pymm P, Tham WH

EMDB-24648:
SARS-CoV-2 Spike bound to Fab PDI 222
Method: single particle / : Glukhova A, Pymm P, Black K, Tham WH

EMDB-24649:
SARS-CoV-2 receptor binding domain bound to Fab PDI 222
Method: single particle / : Pymm P, Glukhova A, Black KA, Tham WH

PDB-7rr0:
SARS-CoV-2 receptor binding domain bound to Fab PDI 222
Method: single particle / : Pymm P, Glukhova A, Black KA, Tham WH

EMDB-23566:
The SARS-CoV-2 spike protein receptor binding domain bound to neutralizing nanobodies WNb 2 and WNb 10
Method: single particle / : Pymm P, Glukhova A, Tham WH

EMDB-23567:
Cryo-EM map of SARS-CoV-2 Spike protein bound to neutralising nanobodies WNb2 and WNb10 (C3 symmetry)
Method: single particle / : Pymm P, Tham WH, Glukhova A

EMDB-23568:
Cryo-EM map of SARS-CoV-2 Spike protein in complex with neutralising nanobodies WNb2 and WNb10 (C1 symmetry)
Method: single particle / : Pymm P, Tham WH, Glukhova A

PDB-7lx5:
The SARS-CoV-2 spike protein receptor binding domain bound to neutralizing nanobodies WNb 2 and WNb 10
Method: single particle / : Pymm P, Glukhova A, Tham WH

EMDB-10619:
CryoEM structure of human CMG bound to ATPgammaS and DNA
Method: single particle / : Rzechorzek NJ, Pellegrini L

EMDB-10620:
CryoEM structure of human CMG bound to ATPgammaS and DNA - MCM2-7 C-tier
Method: single particle / : Rzechorzek NJ, Pellegrini L

EMDB-10621:
CryoEM structure of human CMG bound to AND-1 (CMGA)
Method: single particle / : Rzechorzek NJ, Pellegrini L, Chirgadze DY, Hardwick SW

PDB-6xtx:
CryoEM structure of human CMG bound to ATPgammaS and DNA
Method: single particle / : Rzechorzek NJ, Pellegrini L

Pages:

+
About EMN search

-
News

-
Feb 9, 2022. New format data for meta-information of EMDB entries

New format data for meta-information of EMDB entries

  • Version 3 of the EMDB header file is now the official format.
  • The previous official version 1.9 will be removed from the archive.

Related info.:EMDB header

External links:wwPDB to switch to version 3 of the EMDB data model

-
Oct 5, 2021. Nobel Prize for mechanically activated and temperature-gated ion channels

Nobel Prize for mechanically activated and temperature-gated ion channels

  • The Nobel Prize in Physiology or Medicine 2021 was awarded jointly to David Julius and Ardem Patapoutian "for their discoveries of receptors for temperature and touch."
  • EM Navigator can help to find cryo-EM structure data by both pioneers.

External links:The Nobel Prize in Physiology or Medicine 2021 - NobelPrize.org / Structure data by Ardem Patapoutian / Structure data by David Julius

+
Aug 12, 2020. Covid-19 info

Covid-19 info

URL: https://pdbj.org/emnavi/covid19.php

New page: Covid-19 featured information page in EM Navigator.

Related info.:Covid-19 info / Mar 5, 2020. Novel coronavirus structure data

+
Mar 5, 2020. Novel coronavirus structure data

Novel coronavirus structure data

Related info.:Yorodumi Speices / Aug 12, 2020. Covid-19 info

External links:COVID-19 featured content - PDBj / Molecule of the Month (242):Coronavirus Proteases

+
Jul 5, 2019. Downlodablable text data

Downlodablable text data

Some data of EM Navigator services can be downloaded as text file. Software such as Excel can load the data files.

PageDataFormat
EMN Searchsearch resultCSV, TSV, or JSON
EMN statisticsdata tableCSV or TSV

Related info.:EMN Search / EMN Statistics

-
EMN Search

3DEM data search

Advanced data search for EMDB and EM data in PDB widh various search and display options

Related info.:EMDB / PDB / EM Navigator / Q: What are the data sources of EM Navigator? / Yorodumi Search / Jul 5, 2019. Downlodablable text data

Read more